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R

Trending R repositories on GitHub โ€” ranked by total activity score (stars, forks, pushes, PRs) over the past month.

50
Trending Repos
129
Total Stars
19
Total Forks

๐Ÿ”ฅ Trending R Repos โ€” Past Month

Rank
Repository
Stars
Forks
1
1
rmcelreath/stat_rethinking_2026

Statistical Rethinking Course 2026

20
4
โญ 20๐Ÿด 4
2
2
SocialCatalystLab/ape-papers

Can policy evaluation be automated? Or inevitably create hallucinated AI slop? We are trying to find out.

13
4
โญ 13๐Ÿด 4
3
3
Chandrikajoshi123/R-
3
4
โญ 3๐Ÿด 4
4
4
mengxu98/scop

An end-to-end Single-Cell Omics analysis Pipeline designed to facilitate comprehensive analysis and exploration of single-cell omics data.

7
1
โญ 7๐Ÿด 1
5
5
maxwell2732/hler-working-papers

Human-in-the-Loop Economic Research Working Papers

4
0
โญ 4๐Ÿด 0
6
6
SiatBioInf/panCTC
11
2
โญ 11๐Ÿด 2
7
7
tidyverse/ragnar

RAG in R

2
1
โญ 2๐Ÿด 1
8
8
posit-dev/btw

A complete toolkit for connecting R and LLMs

2
0
โญ 2๐Ÿด 0
9
9
tidyverse/ellmer

Call LLM APIs from R

2
0
โญ 2๐Ÿด 0
10
10
irlcode/RFSD

The Russian Financial Statements Database (RFSD) is an open, harmonized collection of annual unconsolidated financial statements of the universe of Russian firms in 2011-2024. It is the first open data set with information on every active firm in the country, including non-filing firms.

2
0
โญ 2๐Ÿด 0
11
11
biobakery/maaslin3

MaAsLin3: Microbiome Multivariate Association with Linear Models

1
0
โญ 1๐Ÿด 0
12
12
ccao-data/model-res-avm

Automated valuation model for all class 200 residential properties in Cook County (except vacant land and condos)

2
0
โญ 2๐Ÿด 0
13
13
ropensci/rix

Reproducible Data Science environments for R with Nix

2
0
โญ 2๐Ÿด 0
14
14
lcpmgh/colors

ๅญฆๆœฏๆœŸๅˆŠ้…่‰ฒๆŽจ่ๅ™จ

2
0
โญ 2๐Ÿด 0
15
15
cellgeni/schard

reticulate-free single cell format conversion

2
0
โญ 2๐Ÿด 0
16
16
jinworks/CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

2
1
โญ 2๐Ÿด 1
17
17
serkor1/cryptoQuotes

cryptoQuotes is an R package for retrieving historical and real-time cryptocurrency market data from multiple exchanges. It offers an easy-to-use interface for accessing price quotes, trading volumes, and market data, making it valuable for analysts, developers, and crypto enthusiasts.

1
0
โญ 1๐Ÿด 0
18
18
jon-bakker/appliedmultivariatestatistics

Resources associated with "Applied Multivariate Statistics in R" pressbook

1
0
โญ 1๐Ÿด 0
19
19
nmfs-ost/asar

Partially automate a U.S. stock assessment report.

1
0
โญ 1๐Ÿด 0
20
20
nmatzke/3diphy

Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n for

1
0
โญ 1๐Ÿด 0
21
21
pharmaverse/examples

End to end examples of pharmaverse packages for common safety clinical reporting analyses

1
0
โญ 1๐Ÿด 0
22
22
vincentarelbundock/tinytable

Simple and Customizable Tables in `R`

1
0
โญ 1๐Ÿด 0
23
23
yihui/litedown

A lightweight version of R Markdown (without using Pandoc or knitr)

1
0
โญ 1๐Ÿด 0
24
24
ayaka-notes/texlive-full

๐Ÿณ TeXLive-Full in Docker (Specially For Overleaf CEP/Pro)

1
0
โญ 1๐Ÿด 0
25
25
scverse/anndataR

AnnData interoperability in R

1
0
โญ 1๐Ÿด 0
26
26
worldbank/wb-reproducible-research-repository

This repository supports the World Bank's Reproducible Research Repository

1
0
โญ 1๐Ÿด 0
27
27
eddelbuettel/r2u

CRAN as Ubuntu Binaries

2
0
โญ 2๐Ÿด 0
28
28
gesiscss/awesome-computational-social-science

A list of awesome resources for Computational Social Science

2
0
โญ 2๐Ÿด 0
29
29
pola-rs/r-polars

Polars R bindings

2
0
โญ 2๐Ÿด 0
30
30
tidyverse/duckplyr

A drop-in replacement for dplyr, powered by DuckDB for speed.

2
0
โญ 2๐Ÿด 0
31
31
Asa12138/MetaNet

Network analysis for multi-omics

2
0
โญ 2๐Ÿด 0
32
32
junjunlab/scRNAtoolVis

Useful functions to make your scRNA-seq plot more cool!

1
0
โญ 1๐Ÿด 0
33
33
jamesjiadazhan/dietaryindex

R Package for Calculating Healthy Eating Index-2020 (HEI2020), Alternative Healthy Eating Index (AHEI), Dietary Approaches to Stop Hypertension (DASH), Mediterranean Diet (MED), Dietary Inflammation Index (DII), and Planetary Health Diet Index from the EAT-Lancet Commission (PHDI) for the NHANES, ASA24, DHQ, and other dietary assessments

1
0
โญ 1๐Ÿด 0
34
34
junjunlab/ClusterGVis

One-step to Cluster and Visualize Gene Expression Matrix

1
0
โญ 1๐Ÿด 0
35
35
cailab-tamu/scTenifoldKnk

R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

6
0
โญ 6๐Ÿด 0
36
36
ipeaGIT/accessibility

Calculate accessibility measures in R

1
0
โญ 1๐Ÿด 0
37
37
grantmcdermott/etwfe

Extended two-way fixed effects

1
0
โญ 1๐Ÿด 0
38
38
abtassociates/eva

Eva is a HUD application to aid HMIS Leads with data analysis. It is an open-source project intended for local use by HMIS Administrators in Continuums of Care (CoCs) around the U.S. and its territories.

1
0
โญ 1๐Ÿด 0
39
39
rpact-com/rpact

rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

1
0
โญ 1๐Ÿด 0
40
40
USEPA/EPATADA

This R package can be used to compile and evaluate Water Quality Portal (WQP) data for samples collected from surface water monitoring sites on streams and lakes. It can be used to create applications that support water quality programs and help states, tribes, and other stakeholders efficiently analyze the data.

2
0
โญ 2๐Ÿด 0
41
41
zhanghao-njmu/SCP

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

2
0
โญ 2๐Ÿด 0
42
42
hadley/r4ds

R for data science: a book

6
2
โญ 6๐Ÿด 2
43
43
facebookincubator/GeoLift

GeoLift is an end-to-end geo-experimental methodology based on Synthetic Control Methods used to measure the true incremental effect (Lift) of ad campaign.

2
0
โญ 2๐Ÿด 0
44
44
microsoft/finnts

Microsoft Finance Time Series Forecasting Framework (FinnTS) is a forecasting package that utilizes cutting-edge time series forecasting and parallelization on the cloud to produce accurate forecasts for financial data.

1
0
โญ 1๐Ÿด 0
45
45
GabauerDavid/ConnectednessApproach
1
0
โญ 1๐Ÿด 0
46
46
nflverse/nflverse-data

Automated nflverse data repository

1
0
โญ 1๐Ÿด 0
47
47
koenderks/rcityviews

rcityviews is a user-friendly R interface for creating stylized city maps using OpenStreetMap (www.openstreetmap.org) data, implemented as an R package and a Shiny web application.

1
0
โญ 1๐Ÿด 0
48
48
frictionlessdata/frictionless-r

R package to read and write Frictionless Data Packages

1
0
โญ 1๐Ÿด 0
49
49
r-lib/mirai

Minimalist Async Evaluation Framework for R

1
0
โญ 1๐Ÿด 0
50
50
cgroza/GraffiTE

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

1
0
โญ 1๐Ÿด 0

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